Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.26■□□□□ 0.51
CTSFQ9UBX1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 AC008040.2-201ENST00000461049 708 ntBASIC18.25■□□□□ 0.51
CTSFQ9UBX1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 DGCR10-201ENST00000609839 495 ntBASIC18.25■□□□□ 0.51
CTSFQ9UBX1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CTSFQ9UBX1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 AC004951.3-201ENST00000418645 1148 ntBASIC18.24■□□□□ 0.51
CTSFQ9UBX1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 AL160286.2-201ENST00000567150 934 ntBASIC18.24■□□□□ 0.51
CTSFQ9UBX1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 AC130371.2-201ENST00000619443 611 ntBASIC18.24■□□□□ 0.51
CTSFQ9UBX1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTSFQ9UBX1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 AC097488.1-201ENST00000507834 756 ntBASIC18.23■□□□□ 0.51
CTSFQ9UBX1 KRT18P21-201ENST00000515767 1272 ntBASIC18.23■□□□□ 0.51
CTSFQ9UBX1 NAPSB-206ENST00000562112 1266 ntBASIC18.23■□□□□ 0.51
CTSFQ9UBX1 AC010947.1-201ENST00000623454 693 ntBASIC18.23■□□□□ 0.51
CTSFQ9UBX1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSFQ9UBX1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 CRYGFP-201ENST00000418459 633 ntBASIC18.22■□□□□ 0.51
CTSFQ9UBX1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 AC091390.4-202ENST00000476426 537 ntBASIC18.22■□□□□ 0.51
CTSFQ9UBX1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 AC145285.6-201ENST00000604632 637 ntBASIC18.22■□□□□ 0.51
CTSFQ9UBX1 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.22■□□□□ 0.51
CTSFQ9UBX1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms