Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL20A1Q9P218 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
COL20A1Q9P218 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL20A1Q9P218 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.96■■□□□ 1.11
COL20A1Q9P218 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.96■■□□□ 1.11
COL20A1Q9P218 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 AC104076.2-201ENST00000448912 469 ntBASIC21.96■■□□□ 1.11
COL20A1Q9P218 AL023803.3-201ENST00000615559 522 ntBASIC21.96■■□□□ 1.11
COL20A1Q9P218 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL20A1Q9P218 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL20A1Q9P218 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL20A1Q9P218 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.96■■□□□ 1.11
COL20A1Q9P218 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL20A1Q9P218 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
COL20A1Q9P218 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL20A1Q9P218 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL20A1Q9P218 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.95■■□□□ 1.1
COL20A1Q9P218 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL20A1Q9P218 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL20A1Q9P218 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL20A1Q9P218 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL20A1Q9P218 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.95■■□□□ 1.1
COL20A1Q9P218 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.95■■□□□ 1.1
COL20A1Q9P218 CKBP1-201ENST00000565489 1086 ntBASIC21.95■■□□□ 1.1
COL20A1Q9P218 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL20A1Q9P218 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.95■■□□□ 1.1
COL20A1Q9P218 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
COL20A1Q9P218 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
COL20A1Q9P218 KRT8P11-201ENST00000409686 1436 ntBASIC21.95■■□□□ 1.1
COL20A1Q9P218 AC125437.2-201ENST00000625180 2167 ntBASIC21.95■■□□□ 1.1
COL20A1Q9P218 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL20A1Q9P218 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL20A1Q9P218 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.94■■□□□ 1.1
COL20A1Q9P218 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 AC007663.1-201ENST00000438948 1240 ntBASIC21.94■■□□□ 1.1
COL20A1Q9P218 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
COL20A1Q9P218 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
COL20A1Q9P218 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.94■■□□□ 1.1
COL20A1Q9P218 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
COL20A1Q9P218 AL445228.2-201ENST00000605589 952 ntBASIC21.94■■□□□ 1.1
COL20A1Q9P218 AC006011.2-201ENST00000621313 1158 ntBASIC21.94■■□□□ 1.1
COL20A1Q9P218 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.94■■□□□ 1.1
COL20A1Q9P218 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 AC092338.2-201ENST00000568827 1415 ntBASIC21.94■■□□□ 1.1
COL20A1Q9P218 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
COL20A1Q9P218 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
COL20A1Q9P218 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL20A1Q9P218 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
COL20A1Q9P218 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL20A1Q9P218 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
COL20A1Q9P218 ZNF815P-204ENST00000434898 1737 ntBASIC21.93■■□□□ 1.1
COL20A1Q9P218 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL20A1Q9P218 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL20A1Q9P218 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.93■■□□□ 1.1
COL20A1Q9P218 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.93■■□□□ 1.1
COL20A1Q9P218 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.93■■□□□ 1.1
COL20A1Q9P218 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
COL20A1Q9P218 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
COL20A1Q9P218 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL20A1Q9P218 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms