Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 IKBKGP1-201ENST00000612193 1073 ntBASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
THUMPD1Q9NXG2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 SLC29A4P1-201ENST00000398760 971 ntBASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.21■□□□□ 0.51
THUMPD1Q9NXG2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
THUMPD1Q9NXG2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 AC091874.3-201ENST00000512672 1195 ntBASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 MIR4758-201ENST00000577688 71 ntBASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
THUMPD1Q9NXG2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 AL138781.2-201ENST00000617896 1843 ntBASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 AL121906.2-201ENST00000621597 723 ntBASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.19■□□□□ 0.5
THUMPD1Q9NXG2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 HLA-B-256ENST00000639848 1089 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms