Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 AC007613.1-201ENST00000572811 2597 ntBASIC19.15■□□□□ 0.66
MKS1Q9NXB0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.15■□□□□ 0.66
MKS1Q9NXB0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MKS1Q9NXB0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.14■□□□□ 0.66
MKS1Q9NXB0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MKS1Q9NXB0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.14■□□□□ 0.66
MKS1Q9NXB0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MKS1Q9NXB0 AC026471.1-201ENST00000564629 3026 ntBASIC19.14■□□□□ 0.66
MKS1Q9NXB0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.14■□□□□ 0.66
MKS1Q9NXB0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MKS1Q9NXB0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.14■□□□□ 0.65
MKS1Q9NXB0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MKS1Q9NXB0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 LSM12P1-201ENST00000411836 588 ntBASIC19.13■□□□□ 0.65
MKS1Q9NXB0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 AC005829.2-201ENST00000571422 1056 ntBASIC19.13■□□□□ 0.65
MKS1Q9NXB0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MKS1Q9NXB0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 AC087623.3-201ENST00000607047 1098 ntBASIC19.12■□□□□ 0.65
MKS1Q9NXB0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MKS1Q9NXB0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.11■□□□□ 0.65
MKS1Q9NXB0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MKS1Q9NXB0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms