Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 C2orf69P4-201ENST00000565394 541 ntBASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 MYC-209ENST00000641252 345 ntBASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 AC093503.3-201ENST00000624917 2352 ntBASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.1■□□□□ 0.17
LIN7CQ9NUP9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 AC023632.3-201ENST00000521633 145 ntBASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 AC098934.4-201ENST00000564127 592 ntBASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LIN7CQ9NUP9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LIN7CQ9NUP9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LIN7CQ9NUP9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LIN7CQ9NUP9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LIN7CQ9NUP9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LIN7CQ9NUP9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LIN7CQ9NUP9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LIN7CQ9NUP9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LIN7CQ9NUP9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
LIN7CQ9NUP9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LIN7CQ9NUP9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.07■□□□□ 0.16
LIN7CQ9NUP9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms