Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 AP003041.3-201ENST00000527151 707 ntBASIC22.91■■□□□ 1.26
DDX4Q9NQI0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
DDX4Q9NQI0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 FAM8A6P-201ENST00000407496 1135 ntBASIC22.9■■□□□ 1.26
DDX4Q9NQI0 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.9■■□□□ 1.26
DDX4Q9NQI0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 AC011558.1-201ENST00000623459 338 ntBASIC22.9■■□□□ 1.26
DDX4Q9NQI0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.9■■□□□ 1.26
DDX4Q9NQI0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
DDX4Q9NQI0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
DDX4Q9NQI0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.89■■□□□ 1.26
DDX4Q9NQI0 AC104417.2-201ENST00000562989 1793 ntBASIC22.89■■□□□ 1.26
DDX4Q9NQI0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.89■■□□□ 1.25
DDX4Q9NQI0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX4Q9NQI0 RNF152P1-201ENST00000397754 604 ntBASIC22.89■■□□□ 1.25
DDX4Q9NQI0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.89■■□□□ 1.25
DDX4Q9NQI0 COX11P1-201ENST00000489116 835 ntBASIC22.89■■□□□ 1.25
DDX4Q9NQI0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.89■■□□□ 1.25
DDX4Q9NQI0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX4Q9NQI0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.89■■□□□ 1.25
DDX4Q9NQI0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX4Q9NQI0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX4Q9NQI0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
DDX4Q9NQI0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
DDX4Q9NQI0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX4Q9NQI0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.87■■□□□ 1.25
DDX4Q9NQI0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 TSPY5P-201ENST00000426936 936 ntBASIC22.87■■□□□ 1.25
DDX4Q9NQI0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
DDX4Q9NQI0 CLDN5-201ENST00000403084 2357 ntBASIC22.86■■□□□ 1.25
DDX4Q9NQI0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX4Q9NQI0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms