Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NXF3Q9H4D5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.96■□□□□ 0.95
NXF3Q9H4D5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NXF3Q9H4D5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.94■□□□□ 0.94
NXF3Q9H4D5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 AC010203.1-204ENST00000548782 407 ntBASIC20.94■□□□□ 0.94
NXF3Q9H4D5 FAM87A-204ENST00000613235 858 ntBASIC20.94■□□□□ 0.94
NXF3Q9H4D5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 AC073508.3-201ENST00000619697 1419 ntBASIC20.94■□□□□ 0.94
NXF3Q9H4D5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NXF3Q9H4D5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 AL137013.1-201ENST00000432946 1228 ntBASIC20.93■□□□□ 0.94
NXF3Q9H4D5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NXF3Q9H4D5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NXF3Q9H4D5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms