Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NBPF3Q9H094 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.04■■□□□ 1.28
NBPF3Q9H094 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.04■■□□□ 1.28
NBPF3Q9H094 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.04■■□□□ 1.28
NBPF3Q9H094 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
NBPF3Q9H094 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.04■■□□□ 1.28
NBPF3Q9H094 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.03■■□□□ 1.28
NBPF3Q9H094 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF3Q9H094 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
NBPF3Q9H094 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
NBPF3Q9H094 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.03■■□□□ 1.28
NBPF3Q9H094 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF3Q9H094 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.03■■□□□ 1.28
NBPF3Q9H094 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.03■■□□□ 1.28
NBPF3Q9H094 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
NBPF3Q9H094 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.03■■□□□ 1.28
NBPF3Q9H094 AC092865.7-201ENST00000641832 219 ntBASIC23.03■■□□□ 1.28
NBPF3Q9H094 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.03■■□□□ 1.28
NBPF3Q9H094 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF3Q9H094 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NBPF3Q9H094 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
NBPF3Q9H094 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.02■■□□□ 1.28
NBPF3Q9H094 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.02■■□□□ 1.28
NBPF3Q9H094 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
NBPF3Q9H094 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.02■■□□□ 1.28
NBPF3Q9H094 MMP23A-201ENST00000234610 1017 ntBASIC23.02■■□□□ 1.28
NBPF3Q9H094 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 FAM197Y1-201ENST00000421178 764 ntBASIC23.02■■□□□ 1.28
NBPF3Q9H094 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
NBPF3Q9H094 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
NBPF3Q9H094 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.02■■□□□ 1.28
NBPF3Q9H094 AL445675.2-201ENST00000620291 557 ntBASIC23.02■■□□□ 1.28
NBPF3Q9H094 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NBPF3Q9H094 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
NBPF3Q9H094 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 AC104417.2-201ENST00000562989 1793 ntBASIC23.01■■□□□ 1.27
NBPF3Q9H094 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
NBPF3Q9H094 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
NBPF3Q9H094 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC23.01■■□□□ 1.27
NBPF3Q9H094 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
NBPF3Q9H094 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.01■■□□□ 1.27
NBPF3Q9H094 AP002982.1-201ENST00000492365 877 ntBASIC23.01■■□□□ 1.27
NBPF3Q9H094 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.01■■□□□ 1.27
NBPF3Q9H094 AC026471.5-201ENST00000615068 467 ntBASIC23.01■■□□□ 1.27
NBPF3Q9H094 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NBPF3Q9H094 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
NBPF3Q9H094 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.01■■□□□ 1.27
NBPF3Q9H094 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
NBPF3Q9H094 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.01■■□□□ 1.27
NBPF3Q9H094 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23■■□□□ 1.27
NBPF3Q9H094 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23■■□□□ 1.27
NBPF3Q9H094 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23■■□□□ 1.27
NBPF3Q9H094 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF3Q9H094 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
NBPF3Q9H094 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF3Q9H094 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23■■□□□ 1.27
NBPF3Q9H094 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF3Q9H094 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23■■□□□ 1.27
NBPF3Q9H094 AL353807.1-201ENST00000427475 662 ntBASIC23■■□□□ 1.27
NBPF3Q9H094 AC004980.1-204ENST00000429707 299 ntBASIC23■■□□□ 1.27
NBPF3Q9H094 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
NBPF3Q9H094 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF3Q9H094 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23■■□□□ 1.27
NBPF3Q9H094 AC073195.1-201ENST00000607241 877 ntBASIC23■■□□□ 1.27
NBPF3Q9H094 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23■■□□□ 1.27
NBPF3Q9H094 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23■■□□□ 1.27
NBPF3Q9H094 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23■■□□□ 1.27
NBPF3Q9H094 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF3Q9H094 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NBPF3Q9H094 ZNF815P-204ENST00000434898 1737 ntBASIC22.99■■□□□ 1.27
NBPF3Q9H094 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NBPF3Q9H094 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NBPF3Q9H094 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NBPF3Q9H094 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NBPF3Q9H094 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NBPF3Q9H094 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NBPF3Q9H094 KSR1P1-201ENST00000446298 240 ntBASIC22.99■■□□□ 1.27
NBPF3Q9H094 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.99■■□□□ 1.27
NBPF3Q9H094 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.99■■□□□ 1.27
NBPF3Q9H094 AP003071.4-201ENST00000562276 1284 ntBASIC22.99■■□□□ 1.27
NBPF3Q9H094 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms