Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 AL512631.2-201ENST00000604634 923 ntBASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 ANO7L1-203ENST00000602586 1720 ntBASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
SLIRPQ9GZT3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 AC120498.10-201ENST00000621827 505 ntBASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLIRPQ9GZT3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 AL162741.1-201ENST00000565563 1558 ntBASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 IRX1P1-201ENST00000438849 1838 ntBASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLIRPQ9GZT3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 AC084018.2-201ENST00000613093 2607 ntBASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 AC138907.5-202ENST00000569484 235 ntBASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 AL356652.1-201ENST00000615962 565 ntBASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SLIRPQ9GZT3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms