Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 NEFHP1-201ENST00000412845 2629 ntBASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.65■□□□□ 0.74
PHACTR1Q9C0D0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
PHACTR1Q9C0D0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHACTR1Q9C0D0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHACTR1Q9C0D0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
PHACTR1Q9C0D0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHACTR1Q9C0D0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 RAP2CP1-201ENST00000605103 478 ntBASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHACTR1Q9C0D0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 KRT8P8-201ENST00000434750 1448 ntBASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 YBX1P10-201ENST00000444752 975 ntBASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHACTR1Q9C0D0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHACTR1Q9C0D0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 SDHAP1-207ENST00000440850 2000 ntBASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PHACTR1Q9C0D0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms