Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 AC136469.2-201ENST00000623944 1028 ntBASIC15.68■□□□□ 0.1
NKX6-2Q9C056 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NKX6-2Q9C056 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 AL513477.1-201ENST00000602865 2407 ntBASIC15.67■□□□□ 0.1
NKX6-2Q9C056 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 AP004607.4-201ENST00000530158 1459 ntBASIC15.67■□□□□ 0.1
NKX6-2Q9C056 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.67■□□□□ 0.1
NKX6-2Q9C056 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 AC011298.3-201ENST00000615796 283 ntBASIC15.67■□□□□ 0.1
NKX6-2Q9C056 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.67■□□□□ 0.1
NKX6-2Q9C056 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 UNC93B8-201ENST00000511903 705 ntBASIC15.66■□□□□ 0.1
NKX6-2Q9C056 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 AC006333.2-201ENST00000607957 2099 ntBASIC15.66■□□□□ 0.1
NKX6-2Q9C056 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-2Q9C056 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-2Q9C056 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms