Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 AC026366.1-201ENST00000488803 879 ntBASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 AP003097.1-201ENST00000530657 1135 ntBASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 AC142381.4-202ENST00000563973 229 ntBASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 C2orf69P4-201ENST00000565394 541 ntBASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXP3Q9BZS1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 AP006294.2-201ENST00000641667 209 ntBASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXP3Q9BZS1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 AL589743.5-201ENST00000616611 1050 ntBASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 AC073648.6-201ENST00000641589 218 ntBASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 AC141586.3-201ENST00000562166 1838 ntBASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXP3Q9BZS1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms