Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC008687.6-201ENST00000596318 630 ntBASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 AC008403.3-201ENST00000598924 454 ntBASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 AL121829.2-201ENST00000620908 328 ntBASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 AL121906.2-201ENST00000621597 723 ntBASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.83■□□□□ 0.44
RSPO3Q9BXY4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 IRX1P1-201ENST00000438849 1838 ntBASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO3Q9BXY4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 UNC93B4-201ENST00000505679 747 ntBASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 AC133041.1-202ENST00000642053 222 ntBASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO3Q9BXY4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RSPO3Q9BXY4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO3Q9BXY4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO3Q9BXY4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms