Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.22■□□□□ 0.51
YIPF4Q9BSR8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 UNC93B5-201ENST00000530315 699 ntBASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
YIPF4Q9BSR8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 AC098818.2-201ENST00000564925 2320 ntBASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 ESRRAP1-201ENST00000400596 1257 ntBASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 AC020763.4-201ENST00000623414 4170 ntBASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
YIPF4Q9BSR8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 AP000974.1-201ENST00000623909 2387 ntBASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 PRORSD1P-201ENST00000295112 541 ntBASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 AP006294.2-201ENST00000641667 209 ntBASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
YIPF4Q9BSR8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
YIPF4Q9BSR8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms