Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 ZNF815P-204ENST00000434898 1737 ntBASIC18.89■□□□□ 0.61
EBF4Q9BQW3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 Z98044.1-201ENST00000632503 1764 ntBASIC18.89■□□□□ 0.61
EBF4Q9BQW3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 AL355472.2-201ENST00000422958 438 ntBASIC18.89■□□□□ 0.61
EBF4Q9BQW3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 CYP2T3P-201ENST00000601990 817 ntBASIC18.89■□□□□ 0.61
EBF4Q9BQW3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EBF4Q9BQW3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.88■□□□□ 0.61
EBF4Q9BQW3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 AC116351.2-201ENST00000606540 1585 ntBASIC18.88■□□□□ 0.61
EBF4Q9BQW3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 AL354751.1-201ENST00000412768 1863 ntBASIC18.88■□□□□ 0.61
EBF4Q9BQW3 AL512353.2-201ENST00000448759 1962 ntBASIC18.88■□□□□ 0.61
EBF4Q9BQW3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EBF4Q9BQW3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 AC068338.2-201ENST00000563278 1430 ntBASIC18.87■□□□□ 0.61
EBF4Q9BQW3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 LTB4R2-202ENST00000528054 3092 ntBASIC18.87■□□□□ 0.61
EBF4Q9BQW3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.87■□□□□ 0.61
EBF4Q9BQW3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
EBF4Q9BQW3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms