Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXC2Q99958 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXC2Q99958 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.34■□□□□ 0.21
FOXC2Q99958 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 AP000593.1-201ENST00000393668 712 ntBASIC16.34■□□□□ 0.21
FOXC2Q99958 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.34■□□□□ 0.21
FOXC2Q99958 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXC2Q99958 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.34■□□□□ 0.21
FOXC2Q99958 AC004263.2-201ENST00000617183 678 ntBASIC16.34■□□□□ 0.21
FOXC2Q99958 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.34■□□□□ 0.21
FOXC2Q99958 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.34■□□□□ 0.21
FOXC2Q99958 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.34■□□□□ 0.21
FOXC2Q99958 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.34■□□□□ 0.21
FOXC2Q99958 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
FOXC2Q99958 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
FOXC2Q99958 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXC2Q99958 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXC2Q99958 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
FOXC2Q99958 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXC2Q99958 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXC2Q99958 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
FOXC2Q99958 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
FOXC2Q99958 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXC2Q99958 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXC2Q99958 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.33■□□□□ 0.2
FOXC2Q99958 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXC2Q99958 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.33■□□□□ 0.2
FOXC2Q99958 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
FOXC2Q99958 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
FOXC2Q99958 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.33■□□□□ 0.2
FOXC2Q99958 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
FOXC2Q99958 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
FOXC2Q99958 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
FOXC2Q99958 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXC2Q99958 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXC2Q99958 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXC2Q99958 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXC2Q99958 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
FOXC2Q99958 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXC2Q99958 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXC2Q99958 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXC2Q99958 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXC2Q99958 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXC2Q99958 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.32■□□□□ 0.2
FOXC2Q99958 ECEL1P1-201ENST00000373592 1742 ntBASIC16.32■□□□□ 0.2
FOXC2Q99958 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXC2Q99958 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXC2Q99958 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.32■□□□□ 0.2
FOXC2Q99958 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
FOXC2Q99958 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
FOXC2Q99958 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
FOXC2Q99958 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.32■□□□□ 0.2
FOXC2Q99958 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXC2Q99958 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.32■□□□□ 0.2
FOXC2Q99958 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXC2Q99958 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.32■□□□□ 0.2
FOXC2Q99958 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
FOXC2Q99958 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.32■□□□□ 0.2
FOXC2Q99958 SLC25A24-204ENST00000569674 2357 ntBASIC16.32■□□□□ 0.2
FOXC2Q99958 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
FOXC2Q99958 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.32■□□□□ 0.2
FOXC2Q99958 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
FOXC2Q99958 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXC2Q99958 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
FOXC2Q99958 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXC2Q99958 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXC2Q99958 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms