Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NPAS1Q99742 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NPAS1Q99742 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.66■□□□□ 0.42
NPAS1Q99742 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS1Q99742 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS1Q99742 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS1Q99742 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS1Q99742 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS1Q99742 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS1Q99742 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NPAS1Q99742 HTR7P1-201ENST00000538670 1336 ntBASIC17.66■□□□□ 0.42
NPAS1Q99742 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS1Q99742 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS1Q99742 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NPAS1Q99742 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NPAS1Q99742 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NPAS1Q99742 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.65■□□□□ 0.42
NPAS1Q99742 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NPAS1Q99742 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.65■□□□□ 0.42
NPAS1Q99742 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 UBE2SP1-201ENST00000450587 669 ntBASIC17.65■□□□□ 0.42
NPAS1Q99742 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.65■□□□□ 0.42
NPAS1Q99742 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.65■□□□□ 0.42
NPAS1Q99742 C1QL1P1-201ENST00000568105 661 ntBASIC17.65■□□□□ 0.42
NPAS1Q99742 Z99916.2-201ENST00000604037 246 ntBASIC17.65■□□□□ 0.42
NPAS1Q99742 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.65■□□□□ 0.42
NPAS1Q99742 AC004264.1-201ENST00000608354 794 ntBASIC17.65■□□□□ 0.42
NPAS1Q99742 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NPAS1Q99742 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.65■□□□□ 0.42
NPAS1Q99742 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPAS1Q99742 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.65■□□□□ 0.42
NPAS1Q99742 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.64■□□□□ 0.42
NPAS1Q99742 KRT8P8-201ENST00000434750 1448 ntBASIC17.64■□□□□ 0.42
NPAS1Q99742 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.64■□□□□ 0.42
NPAS1Q99742 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NPAS1Q99742 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NPAS1Q99742 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS1Q99742 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS1Q99742 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.64■□□□□ 0.41
NPAS1Q99742 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS1Q99742 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NPAS1Q99742 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.64■□□□□ 0.41
NPAS1Q99742 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
NPAS1Q99742 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NPAS1Q99742 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.64■□□□□ 0.41
NPAS1Q99742 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.64■□□□□ 0.41
NPAS1Q99742 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.64■□□□□ 0.41
NPAS1Q99742 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS1Q99742 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.64■□□□□ 0.41
NPAS1Q99742 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS1Q99742 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.64■□□□□ 0.41
NPAS1Q99742 AC066615.1-201ENST00000640911 628 ntBASIC17.64■□□□□ 0.41
NPAS1Q99742 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS1Q99742 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS1Q99742 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
NPAS1Q99742 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.64■□□□□ 0.41
NPAS1Q99742 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS1Q99742 Z82202.1-201ENST00000623446 1880 ntBASIC17.64■□□□□ 0.41
NPAS1Q99742 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NPAS1Q99742 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPAS1Q99742 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NPAS1Q99742 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.63■□□□□ 0.41
NPAS1Q99742 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS1Q99742 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS1Q99742 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NPAS1Q99742 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NPAS1Q99742 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS1Q99742 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS1Q99742 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
NPAS1Q99742 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.63■□□□□ 0.41
NPAS1Q99742 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.63■□□□□ 0.41
NPAS1Q99742 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS1Q99742 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.63■□□□□ 0.41
NPAS1Q99742 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.63■□□□□ 0.41
NPAS1Q99742 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPAS1Q99742 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms