Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDHB18PQ96TA0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB18PQ96TA0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB18PQ96TA0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 AC093503.3-201ENST00000624917 2352 ntBASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 NBPF21P-201ENST00000425093 1451 ntBASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHB18PQ96TA0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 ESRRAP1-201ENST00000400596 1257 ntBASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PCDHB18PQ96TA0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms