Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.3■□□□□ 0.52
NSMCE2Q96MF7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 AL390961.4-201ENST00000623958 2535 ntBASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 KRT18P68-201ENST00000392293 1000 ntBASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
NSMCE2Q96MF7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 RARRES2P4-201ENST00000514074 484 ntBASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 AC023632.3-201ENST00000521633 145 ntBASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 KRT18P61-201ENST00000585825 1298 ntBASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 AC005837.3-201ENST00000612163 286 ntBASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 AC135050.7-201ENST00000624508 2218 ntBASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 AC090164.3-201ENST00000610780 2143 ntBASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NSMCE2Q96MF7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NSMCE2Q96MF7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NSMCE2Q96MF7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NSMCE2Q96MF7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NSMCE2Q96MF7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NSMCE2Q96MF7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
NSMCE2Q96MF7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NSMCE2Q96MF7 WIZP1-201ENST00000531444 2299 ntBASIC18.26■□□□□ 0.51
NSMCE2Q96MF7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NSMCE2Q96MF7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NSMCE2Q96MF7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NSMCE2Q96MF7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms