Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AL591742.1-201ENST00000604433 565 ntBASIC14.8□□□□□ -0.04
LINC00479Q96M42 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.8□□□□□ -0.04
LINC00479Q96M42 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00479Q96M42 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 FP475955.4-201ENST00000623131 1990 ntBASIC14.79□□□□□ -0.04
LINC00479Q96M42 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LINC00479Q96M42 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00479Q96M42 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 AL031598.1-201ENST00000561511 1773 ntBASIC14.78□□□□□ -0.04
LINC00479Q96M42 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 HLA-G-202ENST00000376815 851 ntBASIC14.78□□□□□ -0.04
LINC00479Q96M42 HLA-G-203ENST00000376818 1127 ntBASIC14.78□□□□□ -0.04
LINC00479Q96M42 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 AC016405.3-201ENST00000607710 860 ntBASIC14.78□□□□□ -0.04
LINC00479Q96M42 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00479Q96M42 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LINC00479Q96M42 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.77□□□□□ -0.04
LINC00479Q96M42 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00479Q96M42 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00479Q96M42 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LINC00479Q96M42 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00479Q96M42 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00479Q96M42 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms