Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC47A1Q96FL8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC47A1Q96FL8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SLC47A1Q96FL8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC47A1Q96FL8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 AL049812.1-201ENST00000432563 2267 ntBASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 AL512625.2-201ENST00000417533 625 ntBASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 AC005181.1-201ENST00000604782 1256 ntBASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 AL589743.5-201ENST00000616611 1050 ntBASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 AC006333.2-201ENST00000607957 2099 ntBASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
SLC47A1Q96FL8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 AC010980.2-201ENST00000587099 1412 ntBASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 AL355472.2-201ENST00000422958 438 ntBASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC47A1Q96FL8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 AC104581.1-202ENST00000635932 2618 ntBASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 AC004911.1-201ENST00000416316 871 ntBASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC47A1Q96FL8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms