Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.41■□□□□ 0.38
CPNE4Q96A23 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 AL445675.2-201ENST00000620291 557 ntBASIC17.41■□□□□ 0.38
CPNE4Q96A23 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 AC113410.3-201ENST00000623366 203 ntBASIC17.41■□□□□ 0.38
CPNE4Q96A23 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE4Q96A23 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE4Q96A23 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE4Q96A23 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CPNE4Q96A23 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CPNE4Q96A23 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE4Q96A23 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 KRT16P1-201ENST00000399124 1418 ntBASIC17.4■□□□□ 0.38
CPNE4Q96A23 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.4■□□□□ 0.38
CPNE4Q96A23 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.4■□□□□ 0.38
CPNE4Q96A23 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.4■□□□□ 0.38
CPNE4Q96A23 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.4■□□□□ 0.38
CPNE4Q96A23 CD177P1-201ENST00000606252 935 ntBASIC17.4■□□□□ 0.38
CPNE4Q96A23 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CPNE4Q96A23 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE4Q96A23 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CPNE4Q96A23 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.4■□□□□ 0.38
CPNE4Q96A23 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CPNE4Q96A23 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CPNE4Q96A23 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPNE4Q96A23 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPNE4Q96A23 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPNE4Q96A23 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPNE4Q96A23 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CPNE4Q96A23 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CPNE4Q96A23 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE4Q96A23 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE4Q96A23 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CPNE4Q96A23 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.39■□□□□ 0.37
CPNE4Q96A23 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE4Q96A23 PCDHAC2-203ENST00000615316 3011 ntBASIC17.39■□□□□ 0.37
CPNE4Q96A23 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CPNE4Q96A23 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE4Q96A23 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CPNE4Q96A23 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.39■□□□□ 0.37
CPNE4Q96A23 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.39■□□□□ 0.37
CPNE4Q96A23 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.39■□□□□ 0.37
CPNE4Q96A23 MIR4785-201ENST00000585005 73 ntBASIC17.39■□□□□ 0.37
CPNE4Q96A23 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.39■□□□□ 0.37
CPNE4Q96A23 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE4Q96A23 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.39■□□□□ 0.37
CPNE4Q96A23 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE4Q96A23 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 MIR4497-201ENST00000583208 89 ntBASIC17.38■□□□□ 0.37
CPNE4Q96A23 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.38■□□□□ 0.37
CPNE4Q96A23 CR392000.1-201ENST00000624770 1228 ntBASIC17.38■□□□□ 0.37
CPNE4Q96A23 HLA-A-209ENST00000638375 975 ntBASIC17.38■□□□□ 0.37
CPNE4Q96A23 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE4Q96A23 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms