Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RBM17P1-201ENST00000453646 1190 ntBASIC20.4■□□□□ 0.86
ATP2A3Q93084 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP2A3Q93084 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP2A3Q93084 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP2A3Q93084 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.4■□□□□ 0.86
ATP2A3Q93084 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.4■□□□□ 0.86
ATP2A3Q93084 AC010331.1-201ENST00000611423 582 ntBASIC20.4■□□□□ 0.86
ATP2A3Q93084 REXO1L10P-201ENST00000615707 1290 ntBASIC20.4■□□□□ 0.86
ATP2A3Q93084 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 CR392000.1-201ENST00000624770 1228 ntBASIC20.4■□□□□ 0.86
ATP2A3Q93084 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP2A3Q93084 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ATP2A3Q93084 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.39■□□□□ 0.86
ATP2A3Q93084 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
ATP2A3Q93084 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.39■□□□□ 0.86
ATP2A3Q93084 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A3Q93084 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP2A3Q93084 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP2A3Q93084 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP2A3Q93084 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A3Q93084 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP2A3Q93084 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A3Q93084 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATP2A3Q93084 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A3Q93084 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A3Q93084 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2A3Q93084 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A3Q93084 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATP2A3Q93084 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP2A3Q93084 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A3Q93084 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP2A3Q93084 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP2A3Q93084 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP2A3Q93084 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A3Q93084 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A3Q93084 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A3Q93084 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A3Q93084 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A3Q93084 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A3Q93084 AC116351.2-201ENST00000606540 1585 ntBASIC20.37■□□□□ 0.85
ATP2A3Q93084 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP2A3Q93084 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP2A3Q93084 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A3Q93084 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A3Q93084 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A3Q93084 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A3Q93084 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A3Q93084 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A3Q93084 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A3Q93084 RCN1P1-201ENST00000400413 996 ntBASIC20.36■□□□□ 0.85
ATP2A3Q93084 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.36■□□□□ 0.85
ATP2A3Q93084 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A3Q93084 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.36■□□□□ 0.85
ATP2A3Q93084 AP000525.1-201ENST00000608286 694 ntBASIC20.36■□□□□ 0.85
ATP2A3Q93084 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A3Q93084 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
ATP2A3Q93084 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ATP2A3Q93084 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A3Q93084 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP2A3Q93084 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A3Q93084 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP2A3Q93084 AC079598.2-202ENST00000546624 1451 ntBASIC20.36■□□□□ 0.85
ATP2A3Q93084 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms