Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
ATP6V0A1Q93050 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 AC073508.3-201ENST00000619697 1419 ntBASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP6V0A1Q93050 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
ATP6V0A1Q93050 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.7■■□□□ 1.07
ATP6V0A1Q93050 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 CRYGFP-201ENST00000418459 633 ntBASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP6V0A1Q93050 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP6V0A1Q93050 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP6V0A1Q93050 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms