Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SEMA4DQ92854 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SEMA4DQ92854 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SEMA4DQ92854 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA4DQ92854 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
SEMA4DQ92854 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.86■□□□□ 0.93
SEMA4DQ92854 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SEMA4DQ92854 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SEMA4DQ92854 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SEMA4DQ92854 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.86■□□□□ 0.93
SEMA4DQ92854 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.86■□□□□ 0.93
SEMA4DQ92854 AC142381.4-202ENST00000563973 229 ntBASIC20.86■□□□□ 0.93
SEMA4DQ92854 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.86■□□□□ 0.93
SEMA4DQ92854 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SEMA4DQ92854 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.86■□□□□ 0.93
SEMA4DQ92854 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SEMA4DQ92854 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 TEX21P-204ENST00000641479 1693 ntBASIC20.85■□□□□ 0.93
SEMA4DQ92854 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SEMA4DQ92854 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 HTR7P1-201ENST00000538670 1336 ntBASIC20.84■□□□□ 0.93
SEMA4DQ92854 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 AL158047.1-201ENST00000445918 881 ntBASIC20.84■□□□□ 0.93
SEMA4DQ92854 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 FAM197Y4-202ENST00000622692 608 ntBASIC20.84■□□□□ 0.93
SEMA4DQ92854 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SEMA4DQ92854 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.84■□□□□ 0.93
SEMA4DQ92854 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.83■□□□□ 0.93
SEMA4DQ92854 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SEMA4DQ92854 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SEMA4DQ92854 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SEMA4DQ92854 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SEMA4DQ92854 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.83■□□□□ 0.93
SEMA4DQ92854 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.83■□□□□ 0.93
SEMA4DQ92854 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SEMA4DQ92854 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.83■□□□□ 0.93
SEMA4DQ92854 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.83■□□□□ 0.93
SEMA4DQ92854 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.83■□□□□ 0.93
SEMA4DQ92854 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SEMA4DQ92854 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.83■□□□□ 0.93
SEMA4DQ92854 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.83■□□□□ 0.93
SEMA4DQ92854 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SEMA4DQ92854 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms