Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
AP3S1Q92572 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
AP3S1Q92572 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3S1Q92572 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S1Q92572 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AP3S1Q92572 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3S1Q92572 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S1Q92572 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3S1Q92572 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3S1Q92572 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3S1Q92572 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.08■□□□□ 0.33
AP3S1Q92572 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
AP3S1Q92572 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3S1Q92572 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3S1Q92572 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.08■□□□□ 0.32
AP3S1Q92572 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S1Q92572 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.08■□□□□ 0.32
AP3S1Q92572 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.08■□□□□ 0.32
AP3S1Q92572 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
AP3S1Q92572 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.08■□□□□ 0.32
AP3S1Q92572 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S1Q92572 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.08■□□□□ 0.32
AP3S1Q92572 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S1Q92572 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.08■□□□□ 0.32
AP3S1Q92572 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.08■□□□□ 0.32
AP3S1Q92572 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.08■□□□□ 0.32
AP3S1Q92572 MIR4767-201ENST00000582827 78 ntBASIC17.08■□□□□ 0.32
AP3S1Q92572 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S1Q92572 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S1Q92572 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S1Q92572 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3S1Q92572 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.07■□□□□ 0.32
AP3S1Q92572 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3S1Q92572 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
AP3S1Q92572 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3S1Q92572 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.07■□□□□ 0.32
AP3S1Q92572 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
AP3S1Q92572 AC091799.1-201ENST00000422823 811 ntBASIC17.07■□□□□ 0.32
AP3S1Q92572 AC010141.2-201ENST00000452426 721 ntBASIC17.07■□□□□ 0.32
AP3S1Q92572 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.07■□□□□ 0.32
AP3S1Q92572 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.07■□□□□ 0.32
AP3S1Q92572 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.07■□□□□ 0.32
AP3S1Q92572 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3S1Q92572 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3S1Q92572 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
AP3S1Q92572 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
AP3S1Q92572 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.06■□□□□ 0.32
AP3S1Q92572 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.06■□□□□ 0.32
AP3S1Q92572 TSPY26P-201ENST00000476365 1326 ntBASIC17.06■□□□□ 0.32
AP3S1Q92572 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3S1Q92572 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 AC243732.1-201ENST00000612648 864 ntBASIC17.06■□□□□ 0.32
AP3S1Q92572 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3S1Q92572 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3S1Q92572 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3S1Q92572 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
AP3S1Q92572 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 TEX21P-204ENST00000641479 1693 ntBASIC17.06■□□□□ 0.32
AP3S1Q92572 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3S1Q92572 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
AP3S1Q92572 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3S1Q92572 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
AP3S1Q92572 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.05■□□□□ 0.32
AP3S1Q92572 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3S1Q92572 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
AP3S1Q92572 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3S1Q92572 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
AP3S1Q92572 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.05■□□□□ 0.32
AP3S1Q92572 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
AP3S1Q92572 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
AP3S1Q92572 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms