Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
SSH3Q8TE77 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.99■■□□□ 1.43
SSH3Q8TE77 AL031985.4-201ENST00000642138 673 ntBASIC23.99■■□□□ 1.43
SSH3Q8TE77 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.99■■□□□ 1.43
SSH3Q8TE77 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
SSH3Q8TE77 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.99■■□□□ 1.43
SSH3Q8TE77 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SSH3Q8TE77 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SSH3Q8TE77 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SSH3Q8TE77 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.99■■□□□ 1.43
SSH3Q8TE77 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 AC116562.4-201ENST00000641316 2276 ntBASIC23.98■■□□□ 1.43
SSH3Q8TE77 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
SSH3Q8TE77 TSPY7P-201ENST00000431358 1114 ntBASIC23.98■■□□□ 1.43
SSH3Q8TE77 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 AC011506.1-201ENST00000474329 610 ntBASIC23.98■■□□□ 1.43
SSH3Q8TE77 AC116562.2-201ENST00000507042 360 ntBASIC23.98■■□□□ 1.43
SSH3Q8TE77 NUDT16P1-203ENST00000513809 620 ntBASIC23.98■■□□□ 1.43
SSH3Q8TE77 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.98■■□□□ 1.43
SSH3Q8TE77 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.98■■□□□ 1.43
SSH3Q8TE77 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.98■■□□□ 1.43
SSH3Q8TE77 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.98■■□□□ 1.43
SSH3Q8TE77 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.98■■□□□ 1.43
SSH3Q8TE77 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SSH3Q8TE77 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SSH3Q8TE77 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SSH3Q8TE77 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.97■■□□□ 1.43
SSH3Q8TE77 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SSH3Q8TE77 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
SSH3Q8TE77 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.97■■□□□ 1.43
SSH3Q8TE77 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SSH3Q8TE77 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.97■■□□□ 1.43
SSH3Q8TE77 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.97■■□□□ 1.43
SSH3Q8TE77 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.97■■□□□ 1.43
SSH3Q8TE77 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SSH3Q8TE77 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.97■■□□□ 1.43
SSH3Q8TE77 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SSH3Q8TE77 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
SSH3Q8TE77 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.97■■□□□ 1.43
SSH3Q8TE77 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SSH3Q8TE77 AC005332.7-201ENST00000614046 2005 ntBASIC23.97■■□□□ 1.43
SSH3Q8TE77 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SSH3Q8TE77 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SSH3Q8TE77 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SSH3Q8TE77 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SSH3Q8TE77 RCC2P6-201ENST00000526625 1557 ntBASIC23.96■■□□□ 1.43
SSH3Q8TE77 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SSH3Q8TE77 AL596275.1-201ENST00000423464 877 ntBASIC23.96■■□□□ 1.43
SSH3Q8TE77 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 SNORA78-201ENST00000459373 127 ntBASIC23.96■■□□□ 1.43
SSH3Q8TE77 AC008040.2-201ENST00000461049 708 ntBASIC23.96■■□□□ 1.43
SSH3Q8TE77 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 MIR4497-201ENST00000583208 89 ntBASIC23.96■■□□□ 1.43
SSH3Q8TE77 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
SSH3Q8TE77 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SSH3Q8TE77 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SSH3Q8TE77 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SSH3Q8TE77 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SSH3Q8TE77 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SSH3Q8TE77 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
SSH3Q8TE77 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SSH3Q8TE77 B3GAT3P1-201ENST00000471720 806 ntBASIC23.95■■□□□ 1.42
SSH3Q8TE77 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.95■■□□□ 1.42
SSH3Q8TE77 AC026471.5-201ENST00000615068 467 ntBASIC23.95■■□□□ 1.42
SSH3Q8TE77 AC130371.2-201ENST00000619443 611 ntBASIC23.95■■□□□ 1.42
SSH3Q8TE77 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SSH3Q8TE77 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SSH3Q8TE77 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
SSH3Q8TE77 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SSH3Q8TE77 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SSH3Q8TE77 AL032819.2-201ENST00000624543 2162 ntBASIC23.95■■□□□ 1.42
SSH3Q8TE77 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SSH3Q8TE77 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.95■■□□□ 1.42
SSH3Q8TE77 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SSH3Q8TE77 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.94■■□□□ 1.42
SSH3Q8TE77 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SSH3Q8TE77 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SSH3Q8TE77 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.94■■□□□ 1.42
SSH3Q8TE77 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.94■■□□□ 1.42
SSH3Q8TE77 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.94■■□□□ 1.42
SSH3Q8TE77 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms