Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 AC023632.3-201ENST00000521633 145 ntBASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DNAAF1Q8NEP3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
DNAAF1Q8NEP3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 C2orf69P4-201ENST00000565394 541 ntBASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.02■□□□□ 0.32
DNAAF1Q8NEP3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.02■□□□□ 0.31
DNAAF1Q8NEP3 PHGDH-210ENST00000641115 1638 ntBASIC17.02■□□□□ 0.31
DNAAF1Q8NEP3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.02■□□□□ 0.31
DNAAF1Q8NEP3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
DNAAF1Q8NEP3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.02■□□□□ 0.31
DNAAF1Q8NEP3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
DNAAF1Q8NEP3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 AL138781.2-201ENST00000617896 1843 ntBASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 AL355472.2-201ENST00000422958 438 ntBASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
DNAAF1Q8NEP3 AC104581.1-202ENST00000635932 2618 ntBASIC17■□□□□ 0.31
DNAAF1Q8NEP3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 AL049812.1-201ENST00000432563 2267 ntBASIC17■□□□□ 0.31
DNAAF1Q8NEP3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17■□□□□ 0.31
DNAAF1Q8NEP3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms