Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PSD4Q8NDX1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.27■□□□□ 0.52
PSD4Q8NDX1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSD4Q8NDX1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.27■□□□□ 0.51
PSD4Q8NDX1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PSD4Q8NDX1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.27■□□□□ 0.51
PSD4Q8NDX1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
PSD4Q8NDX1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.27■□□□□ 0.51
PSD4Q8NDX1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PSD4Q8NDX1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PSD4Q8NDX1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PSD4Q8NDX1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 NEFHP1-201ENST00000412845 2629 ntBASIC18.24■□□□□ 0.51
PSD4Q8NDX1 AP000974.1-201ENST00000623909 2387 ntBASIC18.24■□□□□ 0.51
PSD4Q8NDX1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PSD4Q8NDX1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PSD4Q8NDX1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms