Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 AC011506.1-201ENST00000474329 610 ntBASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 NAPSB-206ENST00000562112 1266 ntBASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CNEP1R1Q8N9A8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 AC097488.1-201ENST00000507834 756 ntBASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 FITM1-202ENST00000559294 800 ntBASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 AC011298.2-201ENST00000617989 482 ntBASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNEP1R1Q8N9A8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CNEP1R1Q8N9A8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CNEP1R1Q8N9A8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNEP1R1Q8N9A8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 RCC2P6-201ENST00000526625 1557 ntBASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 MESTP1-201ENST00000404287 994 ntBASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 CRYGFP-201ENST00000418459 633 ntBASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 AC004951.3-201ENST00000418645 1148 ntBASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 SLC25A1P4-201ENST00000567977 778 ntBASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 DGCR10-201ENST00000609839 495 ntBASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 AC097493.4-201ENST00000641197 219 ntBASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNEP1R1Q8N9A8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 LINC01568-207ENST00000641790 1380 ntBASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 FAM210CP-201ENST00000445714 574 ntBASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNEP1R1Q8N9A8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms