Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 B3GAT3P1-201ENST00000471720 806 ntBASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 AC011506.1-201ENST00000474329 610 ntBASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 NAPSB-206ENST00000562112 1266 ntBASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 LINC01568-207ENST00000641790 1380 ntBASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 FSCN1P1-201ENST00000568912 1481 ntBASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHTF2Q8N3S3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 AC092865.7-201ENST00000641832 219 ntBASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHTF2Q8N3S3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 AC005521.1-201ENST00000393351 872 ntBASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 AC005363.2-201ENST00000618631 242 ntBASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 BX119927.1-201ENST00000636596 1552 ntBASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.03■□□□□ 0.8
PHTF2Q8N3S3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 AC113347.1-201ENST00000413321 391 ntBASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PHTF2Q8N3S3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHTF2Q8N3S3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.02■□□□□ 0.79
PHTF2Q8N3S3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
PHTF2Q8N3S3 AC073508.3-201ENST00000619697 1419 ntBASIC20.02■□□□□ 0.79
PHTF2Q8N3S3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 AP005242.2-201ENST00000580065 1175 ntBASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 DGCR10-201ENST00000609839 495 ntBASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 HLA-A-209ENST00000638375 975 ntBASIC20.01■□□□□ 0.79
PHTF2Q8N3S3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms