Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 AC004980.1-204ENST00000429707 299 ntBASIC20.99■□□□□ 0.95
VPS52Q8N1B4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS52Q8N1B4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 AC104076.2-201ENST00000448912 469 ntBASIC20.98■□□□□ 0.95
VPS52Q8N1B4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 AP005242.2-201ENST00000580065 1175 ntBASIC20.98■□□□□ 0.95
VPS52Q8N1B4 DGCR10-201ENST00000609839 495 ntBASIC20.98■□□□□ 0.95
VPS52Q8N1B4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 AC131212.4-201ENST00000623606 975 ntBASIC20.98■□□□□ 0.95
VPS52Q8N1B4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 AC092720.2-201ENST00000602388 1665 ntBASIC20.98■□□□□ 0.95
VPS52Q8N1B4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS52Q8N1B4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 AC007952.6-201ENST00000573168 2673 ntBASIC20.97■□□□□ 0.95
VPS52Q8N1B4 AC003957.1-201ENST00000625108 2673 ntBASIC20.97■□□□□ 0.95
VPS52Q8N1B4 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.97■□□□□ 0.95
VPS52Q8N1B4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 AC097488.1-201ENST00000507834 756 ntBASIC20.97■□□□□ 0.95
VPS52Q8N1B4 AC010203.1-204ENST00000548782 407 ntBASIC20.97■□□□□ 0.95
VPS52Q8N1B4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS52Q8N1B4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 CRYGFP-201ENST00000418459 633 ntBASIC20.96■□□□□ 0.95
VPS52Q8N1B4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 LIN28AP1-201ENST00000429574 405 ntBASIC20.96■□□□□ 0.95
VPS52Q8N1B4 ECEL1P2-202ENST00000465689 757 ntBASIC20.96■□□□□ 0.95
VPS52Q8N1B4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 DUX4L26-201ENST00000489078 1255 ntBASIC20.96■□□□□ 0.95
VPS52Q8N1B4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 EGLN1P1-201ENST00000531623 762 ntBASIC20.96■□□□□ 0.95
VPS52Q8N1B4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.96■□□□□ 0.95
VPS52Q8N1B4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS52Q8N1B4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms