Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 FITM1-202ENST00000559294 800 ntBASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 AL160286.2-201ENST00000567150 934 ntBASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN4BQ8IWT1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 CRYGFP-201ENST00000418459 633 ntBASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 AC097488.1-201ENST00000507834 756 ntBASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 SLC25A1P4-201ENST00000567977 778 ntBASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 AC130371.2-201ENST00000619443 611 ntBASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.45■□□□□ 0.86
SCN4BQ8IWT1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 AC008040.2-201ENST00000461049 708 ntBASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.44■□□□□ 0.86
SCN4BQ8IWT1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 CYP2D8P-201ENST00000433633 1490 ntBASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 Z85996.1-201ENST00000494644 937 ntBASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 NAPSB-206ENST00000562112 1266 ntBASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 DGCR10-201ENST00000609839 495 ntBASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 AC097493.4-201ENST00000641197 219 ntBASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.43■□□□□ 0.86
SCN4BQ8IWT1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms