Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TSPY18P-201ENST00000441642 509 ntBASIC24.42■■□□□ 1.5
COL23A1Q86Y22 MPI-205ENST00000562606 1052 ntTSL 3 BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 CD37-204ENST00000535669 1674 ntTSL 2 BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.42■■□□□ 1.5
COL23A1Q86Y22 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL23A1Q86Y22 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 ILF2-202ENST00000368681 726 ntTSL 2 BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL23A1Q86Y22 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL23A1Q86Y22 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.39■■□□□ 1.5
COL23A1Q86Y22 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.39■■□□□ 1.5
COL23A1Q86Y22 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL23A1Q86Y22 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 FEM1AP4-201ENST00000443167 1987 ntBASIC24.38■■□□□ 1.49
COL23A1Q86Y22 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 AC092720.2-201ENST00000602388 1665 ntBASIC24.38■■□□□ 1.49
COL23A1Q86Y22 BUB3-202ENST00000368859 667 ntTSL 3 BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 TBC1D3P2-202ENST00000577902 1649 ntBASIC24.38■■□□□ 1.49
COL23A1Q86Y22 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL23A1Q86Y22 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.37■■□□□ 1.49
COL23A1Q86Y22 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.36■■□□□ 1.49
COL23A1Q86Y22 KRT18P1-202ENST00000452408 1331 ntBASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms