Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
LDB1Q86U70 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LDB1Q86U70 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LDB1Q86U70 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDB1Q86U70 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LDB1Q86U70 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LDB1Q86U70 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDB1Q86U70 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.34■□□□□ 0.69
LDB1Q86U70 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.34■□□□□ 0.69
LDB1Q86U70 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB1Q86U70 PRKY-204ENST00000533551 1019 ntBASIC19.34■□□□□ 0.69
LDB1Q86U70 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB1Q86U70 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB1Q86U70 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LDB1Q86U70 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB1Q86U70 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LDB1Q86U70 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.34■□□□□ 0.69
LDB1Q86U70 SDHAP1-207ENST00000440850 2000 ntBASIC19.34■□□□□ 0.69
LDB1Q86U70 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LDB1Q86U70 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LDB1Q86U70 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
LDB1Q86U70 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDB1Q86U70 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.33■□□□□ 0.69
LDB1Q86U70 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDB1Q86U70 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LDB1Q86U70 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LDB1Q86U70 LINC01465-201ENST00000408887 1940 ntBASIC19.33■□□□□ 0.69
LDB1Q86U70 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDB1Q86U70 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LDB1Q86U70 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDB1Q86U70 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LDB1Q86U70 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LDB1Q86U70 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.33■□□□□ 0.68
LDB1Q86U70 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LDB1Q86U70 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.33■□□□□ 0.68
LDB1Q86U70 TUBB8P6-201ENST00000436895 1288 ntBASIC19.33■□□□□ 0.68
LDB1Q86U70 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.33■□□□□ 0.68
LDB1Q86U70 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.33■□□□□ 0.68
LDB1Q86U70 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.33■□□□□ 0.68
LDB1Q86U70 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LDB1Q86U70 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.33■□□□□ 0.68
LDB1Q86U70 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 NBPF21P-201ENST00000425093 1451 ntBASIC19.33■□□□□ 0.68
LDB1Q86U70 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.33■□□□□ 0.68
LDB1Q86U70 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LDB1Q86U70 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB1Q86U70 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LDB1Q86U70 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB1Q86U70 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB1Q86U70 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB1Q86U70 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB1Q86U70 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.32■□□□□ 0.68
LDB1Q86U70 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LDB1Q86U70 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LDB1Q86U70 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB1Q86U70 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.32■□□□□ 0.68
LDB1Q86U70 AC006058.3-201ENST00000606217 1069 ntBASIC19.32■□□□□ 0.68
LDB1Q86U70 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
LDB1Q86U70 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB1Q86U70 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LDB1Q86U70 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB1Q86U70 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.32■□□□□ 0.68
LDB1Q86U70 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB1Q86U70 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.32■□□□□ 0.68
LDB1Q86U70 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LDB1Q86U70 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.32■□□□□ 0.68
LDB1Q86U70 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB1Q86U70 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.31■□□□□ 0.68
LDB1Q86U70 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.31■□□□□ 0.68
LDB1Q86U70 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.31■□□□□ 0.68
LDB1Q86U70 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LDB1Q86U70 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB1Q86U70 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB1Q86U70 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB1Q86U70 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDB1Q86U70 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDB1Q86U70 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LDB1Q86U70 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.31■□□□□ 0.68
LDB1Q86U70 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.31■□□□□ 0.68
LDB1Q86U70 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDB1Q86U70 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDB1Q86U70 AC073648.6-201ENST00000641589 218 ntBASIC19.31■□□□□ 0.68
LDB1Q86U70 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.31■□□□□ 0.68
LDB1Q86U70 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.31■□□□□ 0.68
LDB1Q86U70 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB1Q86U70 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB1Q86U70 AC104417.2-201ENST00000562989 1793 ntBASIC19.31■□□□□ 0.68
LDB1Q86U70 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LDB1Q86U70 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms