Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 ITM2C-210ENST00000620962 501 ntBASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDHR3Q6ZTQ4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 AC104581.1-202ENST00000635932 2618 ntBASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 AC026366.1-201ENST00000488803 879 ntBASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 AC023632.3-201ENST00000521633 145 ntBASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 AP003097.1-201ENST00000530657 1135 ntBASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 TEX21P-204ENST00000641479 1693 ntBASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDHR3Q6ZTQ4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 AC006333.2-201ENST00000607957 2099 ntBASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 KRT18P29-201ENST00000397031 1267 ntBASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.42■□□□□ 0.7
CDHR3Q6ZTQ4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDHR3Q6ZTQ4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms