Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC27A1Q6PCB7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC27A1Q6PCB7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC27A1Q6PCB7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC27A1Q6PCB7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC27A1Q6PCB7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC27A1Q6PCB7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC27A1Q6PCB7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC27A1Q6PCB7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 AC113347.1-201ENST00000413321 391 ntBASIC21■□□□□ 0.95
SLC27A1Q6PCB7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21■□□□□ 0.95
SLC27A1Q6PCB7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 SLC25A3P1-201ENST00000443844 931 ntBASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC27A1Q6PCB7 ZNF815P-204ENST00000434898 1737 ntBASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 AC104417.2-201ENST00000562989 1793 ntBASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 AC128688.1-201ENST00000487626 519 ntBASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC27A1Q6PCB7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 AC005521.1-201ENST00000393351 872 ntBASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 CKBP1-201ENST00000565489 1086 ntBASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 RN7SL850P-201ENST00000579959 291 ntBASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 AC092865.7-201ENST00000641832 219 ntBASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC27A1Q6PCB7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms