Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 HLA-A-209ENST00000638375 975 ntBASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 AP006294.2-201ENST00000641667 209 ntBASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PPP4R3AQ6IN85 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 RPS2P55-201ENST00000397318 883 ntBASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 AC012618.2-201ENST00000428058 849 ntBASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 AC107956.1-201ENST00000494359 873 ntBASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 AC233702.5-201ENST00000584107 538 ntBASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PPP4R3AQ6IN85 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 KSR1P1-201ENST00000446298 240 ntBASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 AC008550.1-201ENST00000511500 884 ntBASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 AL445675.2-201ENST00000620291 557 ntBASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.03■■□□□ 1.12
PPP4R3AQ6IN85 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 AP002982.1-201ENST00000492365 877 ntBASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 Z99916.2-201ENST00000604037 246 ntBASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 ZNF815P-204ENST00000434898 1737 ntBASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
PPP4R3AQ6IN85 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
PPP4R3AQ6IN85 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PPP4R3AQ6IN85 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 RNF165-205ENST00000588679 2904 ntBASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 AC073195.1-201ENST00000607241 877 ntBASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.01■■□□□ 1.11
PPP4R3AQ6IN85 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 SAPCD2P4-201ENST00000424595 1171 ntBASIC22■■□□□ 1.11
PPP4R3AQ6IN85 RPS2P4-201ENST00000476944 856 ntBASIC22■■□□□ 1.11
PPP4R3AQ6IN85 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PPP4R3AQ6IN85 AC104417.2-201ENST00000562989 1793 ntBASIC21.99■■□□□ 1.11
PPP4R3AQ6IN85 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms