Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 AC026271.3-201ENST00000571884 352 ntBASIC17.49■□□□□ 0.39
RTL6Q6ICC9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 LINC01568-207ENST00000641790 1380 ntBASIC17.49■□□□□ 0.39
RTL6Q6ICC9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RTL6Q6ICC9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 AC004980.1-204ENST00000429707 299 ntBASIC17.48■□□□□ 0.39
RTL6Q6ICC9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 B3GAT3P1-201ENST00000471720 806 ntBASIC17.48■□□□□ 0.39
RTL6Q6ICC9 AC011506.1-201ENST00000474329 610 ntBASIC17.48■□□□□ 0.39
RTL6Q6ICC9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 NAPSB-206ENST00000562112 1266 ntBASIC17.48■□□□□ 0.39
RTL6Q6ICC9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 FSCN1P1-201ENST00000568912 1481 ntBASIC17.48■□□□□ 0.39
RTL6Q6ICC9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RTL6Q6ICC9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 AC005363.2-201ENST00000618631 242 ntBASIC17.47■□□□□ 0.39
RTL6Q6ICC9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 AL162377.1-201ENST00000618844 1793 ntBASIC17.47■□□□□ 0.39
RTL6Q6ICC9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTL6Q6ICC9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 BX119927.1-201ENST00000636596 1552 ntBASIC17.46■□□□□ 0.39
RTL6Q6ICC9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 AC005521.1-201ENST00000393351 872 ntBASIC17.46■□□□□ 0.39
RTL6Q6ICC9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 AC092865.7-201ENST00000641832 219 ntBASIC17.46■□□□□ 0.39
RTL6Q6ICC9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTL6Q6ICC9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms