Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
RNF213Q63HN8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC10.4□□□□□ -0.75
RNF213Q63HN8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 AL008721.1-201ENST00000609964 604 ntBASIC10.39□□□□□ -0.75
RNF213Q63HN8 FAM215A-202ENST00000632077 792 ntBASIC10.39□□□□□ -0.75
RNF213Q63HN8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 AC093909.1-201ENST00000504731 1122 ntBASIC10.39□□□□□ -0.75
RNF213Q63HN8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 AC190387.1-201ENST00000551683 408 ntBASIC10.39□□□□□ -0.75
RNF213Q63HN8 AC034105.1-201ENST00000563488 319 ntBASIC10.39□□□□□ -0.75
RNF213Q63HN8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 AF186996.4-201ENST00000467186 377 ntBASIC10.39□□□□□ -0.75
RNF213Q63HN8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 AP006587.1-201ENST00000534129 1502 ntBASIC10.39□□□□□ -0.75
RNF213Q63HN8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
RNF213Q63HN8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC10.39□□□□□ -0.75
RNF213Q63HN8 AC139887.3-201ENST00000568585 713 ntBASIC10.39□□□□□ -0.75
RNF213Q63HN8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 GAPDHP21-201ENST00000450301 1010 ntBASIC10.38□□□□□ -0.75
RNF213Q63HN8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 GOLGA6L3-201ENST00000507199 1679 ntBASIC10.38□□□□□ -0.75
RNF213Q63HN8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 FAM197Y3-203ENST00000618346 717 ntBASIC10.38□□□□□ -0.75
RNF213Q63HN8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 AL096865.1-201ENST00000606796 927 ntBASIC10.38□□□□□ -0.75
RNF213Q63HN8 AC116407.3-201ENST00000623905 1129 ntBASIC10.38□□□□□ -0.75
RNF213Q63HN8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
RNF213Q63HN8 MEIS3P1-201ENST00000495167 958 ntBASIC10.38□□□□□ -0.75
RNF213Q63HN8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 MIR4469-201ENST00000583919 79 ntBASIC10.38□□□□□ -0.75
RNF213Q63HN8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC10.38□□□□□ -0.75
RNF213Q63HN8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 MIR4745-201ENST00000577608 62 ntBASIC10.37□□□□□ -0.75
RNF213Q63HN8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 AC093525.10-201ENST00000625130 1569 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms