Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 AC246785.2-201ENST00000432512 513 ntBASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 EMBP1-201ENST00000458200 901 ntBASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.09□□□□□ -0.31
VPS13DQ5THJ4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VPS13DQ5THJ4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VPS13DQ5THJ4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.08□□□□□ -0.31
VPS13DQ5THJ4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 ATP5G2P1-201ENST00000433580 426 ntBASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13DQ5THJ4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 KRT17P6-201ENST00000453795 1220 ntBASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 AL732292.2-201ENST00000609649 430 ntBASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 GPALPP1-207ENST00000611650 899 ntBASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 NPAP1P7-201ENST00000613027 823 ntBASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VPS13DQ5THJ4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 AC009078.2-202ENST00000463353 338 ntBASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 AL031432.5-201ENST00000641059 760 ntBASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 AL645929.1-201ENST00000420084 975 ntBASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms