Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 AP000692.2-201ENST00000608391 879 ntBASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 AC009237.14-201ENST00000609975 1594 ntBASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.47■□□□□ 0.23
ARFGEF3Q5TH69 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 KRT8P41-201ENST00000533985 1514 ntBASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 TERF1P1-201ENST00000311003 1181 ntBASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 AC007663.1-201ENST00000438948 1240 ntBASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ARFGEF3Q5TH69 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
ARFGEF3Q5TH69 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
ARFGEF3Q5TH69 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.46■□□□□ 0.22
ARFGEF3Q5TH69 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
ARFGEF3Q5TH69 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.46■□□□□ 0.22
ARFGEF3Q5TH69 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
ARFGEF3Q5TH69 CRYGFP-201ENST00000418459 633 ntBASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 AL049597.2-201ENST00000565575 961 ntBASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 NAPSB-206ENST00000562112 1266 ntBASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 AFG3L1P-217ENST00000557444 2447 ntBASIC16.45■□□□□ 0.22
ARFGEF3Q5TH69 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARFGEF3Q5TH69 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARFGEF3Q5TH69 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARFGEF3Q5TH69 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARFGEF3Q5TH69 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ARFGEF3Q5TH69 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ARFGEF3Q5TH69 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
ARFGEF3Q5TH69 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ARFGEF3Q5TH69 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms