Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.29■□□□□ 0.68
LDLRAP1Q5SW96 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 AP002982.1-201ENST00000492365 877 ntBASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 AL353708.3-201ENST00000610272 989 ntBASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDLRAP1Q5SW96 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 MIR718-201ENST00000390190 70 ntBASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 AC012618.2-201ENST00000428058 849 ntBASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 AC008550.1-201ENST00000511500 884 ntBASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 AP001412.1-201ENST00000608405 714 ntBASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
LDLRAP1Q5SW96 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LDLRAP1Q5SW96 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
LDLRAP1Q5SW96 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LDLRAP1Q5SW96 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LDLRAP1Q5SW96 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.27■□□□□ 0.67
LDLRAP1Q5SW96 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.27■□□□□ 0.67
LDLRAP1Q5SW96 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LDLRAP1Q5SW96 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LDLRAP1Q5SW96 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
LDLRAP1Q5SW96 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 AF186192.3-201ENST00000583427 947 ntBASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.26■□□□□ 0.67
LDLRAP1Q5SW96 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms