Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4BQ5SQS7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D4BQ5SQS7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 HTR7P1-202ENST00000624664 4411 ntBASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 AL355472.2-201ENST00000422958 438 ntBASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 DUX4L16-201ENST00000555130 1264 ntBASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SH2D4BQ5SQS7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.17■□□□□ 0.66
SH2D4BQ5SQS7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 CYP2T1P-201ENST00000432607 1285 ntBASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 AC069236.1-201ENST00000604339 616 ntBASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 IKBKGP1-201ENST00000612193 1073 ntBASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 AC011767.1-201ENST00000617410 1153 ntBASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D4BQ5SQS7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.15■□□□□ 0.66
SH2D4BQ5SQS7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms