Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.82■□□□□ 0.6
SGO1Q5FBB7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SGO1Q5FBB7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 AC060766.5-201ENST00000590539 871 ntBASIC18.81■□□□□ 0.6
SGO1Q5FBB7 AC104771.1-201ENST00000603335 964 ntBASIC18.81■□□□□ 0.6
SGO1Q5FBB7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SGO1Q5FBB7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.8■□□□□ 0.6
SGO1Q5FBB7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 AC133041.1-202ENST00000642053 222 ntBASIC18.8■□□□□ 0.6
SGO1Q5FBB7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 BX323043.1-201ENST00000641006 1765 ntBASIC18.8■□□□□ 0.6
SGO1Q5FBB7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SGO1Q5FBB7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 AC004408.2-201ENST00000623613 2777 ntBASIC18.79■□□□□ 0.6
SGO1Q5FBB7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms