Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RUNDC3AQ59EK9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RUNDC3AQ59EK9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RUNDC3AQ59EK9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RUNDC3AQ59EK9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
RUNDC3AQ59EK9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.3■□□□□ 0.52
RUNDC3AQ59EK9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RUNDC3AQ59EK9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 AC026271.2-201ENST00000428091 497 ntBASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 AC073210.2-201ENST00000430369 194 ntBASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RUNDC3AQ59EK9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RUNDC3AQ59EK9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 AL390719.1-204ENST00000412397 1219 ntBASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 AC004911.1-201ENST00000416316 871 ntBASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 AC005829.2-201ENST00000571422 1056 ntBASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RUNDC3AQ59EK9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RUNDC3AQ59EK9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RUNDC3AQ59EK9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RUNDC3AQ59EK9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.27■□□□□ 0.51
RUNDC3AQ59EK9 AL031598.1-201ENST00000561511 1773 ntBASIC18.27■□□□□ 0.51
RUNDC3AQ59EK9 AC104417.2-201ENST00000562989 1793 ntBASIC18.27■□□□□ 0.51
RUNDC3AQ59EK9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RUNDC3AQ59EK9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RUNDC3AQ59EK9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RUNDC3AQ59EK9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.26■□□□□ 0.51
RUNDC3AQ59EK9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms