Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.96■□□□□ 0.79
ALFQ53S48 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ALFQ53S48 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ALFQ53S48 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ALFQ53S48 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ALFQ53S48 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.95■□□□□ 0.78
ALFQ53S48 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.95■□□□□ 0.78
ALFQ53S48 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.95■□□□□ 0.78
ALFQ53S48 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 AC004980.1-204ENST00000429707 299 ntBASIC19.95■□□□□ 0.78
ALFQ53S48 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.95■□□□□ 0.78
ALFQ53S48 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.95■□□□□ 0.78
ALFQ53S48 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.95■□□□□ 0.78
ALFQ53S48 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.95■□□□□ 0.78
ALFQ53S48 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ALFQ53S48 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ALFQ53S48 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.94■□□□□ 0.78
ALFQ53S48 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.94■□□□□ 0.78
ALFQ53S48 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.94■□□□□ 0.78
ALFQ53S48 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ALFQ53S48 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
ALFQ53S48 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.94■□□□□ 0.78
ALFQ53S48 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.94■□□□□ 0.78
ALFQ53S48 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.94■□□□□ 0.78
ALFQ53S48 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ALFQ53S48 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ALFQ53S48 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALFQ53S48 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ALFQ53S48 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ALFQ53S48 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ALFQ53S48 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALFQ53S48 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ALFQ53S48 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.93■□□□□ 0.78
ALFQ53S48 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALFQ53S48 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.93■□□□□ 0.78
ALFQ53S48 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.93■□□□□ 0.78
ALFQ53S48 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALFQ53S48 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.93■□□□□ 0.78
ALFQ53S48 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.93■□□□□ 0.78
ALFQ53S48 AC026471.5-201ENST00000615068 467 ntBASIC19.93■□□□□ 0.78
ALFQ53S48 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ALFQ53S48 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.93■□□□□ 0.78
ALFQ53S48 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.93■□□□□ 0.78
ALFQ53S48 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
ALFQ53S48 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALFQ53S48 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.93■□□□□ 0.78
ALFQ53S48 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ALFQ53S48 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ALFQ53S48 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ALFQ53S48 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 NUDT16P1-203ENST00000513809 620 ntBASIC19.92■□□□□ 0.78
ALFQ53S48 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ALFQ53S48 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.92■□□□□ 0.78
ALFQ53S48 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.92■□□□□ 0.78
ALFQ53S48 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ALFQ53S48 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
ALFQ53S48 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.91■□□□□ 0.78
ALFQ53S48 ZNF815P-204ENST00000434898 1737 ntBASIC19.91■□□□□ 0.78
ALFQ53S48 AC104417.2-201ENST00000562989 1793 ntBASIC19.91■□□□□ 0.78
ALFQ53S48 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.91■□□□□ 0.78
ALFQ53S48 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
ALFQ53S48 TSPY15P-201ENST00000457163 923 ntBASIC19.91■□□□□ 0.78
ALFQ53S48 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.91■□□□□ 0.78
ALFQ53S48 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.91■□□□□ 0.78
ALFQ53S48 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.91■□□□□ 0.78
ALFQ53S48 MIR4785-201ENST00000585005 73 ntBASIC19.91■□□□□ 0.78
ALFQ53S48 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.91■□□□□ 0.78
ALFQ53S48 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
ALFQ53S48 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALFQ53S48 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms