Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.15■■□□□ 1.3
CNTNAP1P78357 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
CNTNAP1P78357 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CNTNAP1P78357 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.14■■□□□ 1.3
CNTNAP1P78357 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CNTNAP1P78357 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.14■■□□□ 1.3
CNTNAP1P78357 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CNTNAP1P78357 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.14■■□□□ 1.3
CNTNAP1P78357 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.3
CNTNAP1P78357 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.14■■□□□ 1.3
CNTNAP1P78357 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
CNTNAP1P78357 AC104692.2-201ENST00000603054 253 ntBASIC23.14■■□□□ 1.3
CNTNAP1P78357 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.14■■□□□ 1.3
CNTNAP1P78357 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CNTNAP1P78357 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CNTNAP1P78357 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CNTNAP1P78357 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
CNTNAP1P78357 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CNTNAP1P78357 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.14■■□□□ 1.29
CNTNAP1P78357 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CNTNAP1P78357 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CNTNAP1P78357 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.14■■□□□ 1.29
CNTNAP1P78357 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CNTNAP1P78357 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CNTNAP1P78357 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.14■■□□□ 1.29
CNTNAP1P78357 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.14■■□□□ 1.29
CNTNAP1P78357 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CNTNAP1P78357 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CNTNAP1P78357 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.14■■□□□ 1.29
CNTNAP1P78357 AL353719.1-201ENST00000566847 864 ntBASIC23.14■■□□□ 1.29
CNTNAP1P78357 AL671883.3-201ENST00000603274 991 ntBASIC23.14■■□□□ 1.29
CNTNAP1P78357 IFNL4P1-201ENST00000607083 540 ntBASIC23.14■■□□□ 1.29
CNTNAP1P78357 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.13■■□□□ 1.29
CNTNAP1P78357 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CNTNAP1P78357 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
CNTNAP1P78357 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CNTNAP1P78357 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.13■■□□□ 1.29
CNTNAP1P78357 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.13■■□□□ 1.29
CNTNAP1P78357 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.13■■□□□ 1.29
CNTNAP1P78357 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.13■■□□□ 1.29
CNTNAP1P78357 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.13■■□□□ 1.29
CNTNAP1P78357 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CNTNAP1P78357 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CNTNAP1P78357 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP1P78357 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CNTNAP1P78357 LINC01311-201ENST00000565162 1445 ntBASIC23.12■■□□□ 1.29
CNTNAP1P78357 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP1P78357 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CNTNAP1P78357 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP1P78357 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP1P78357 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP1P78357 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP1P78357 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP1P78357 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.12■■□□□ 1.29
CNTNAP1P78357 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.12■■□□□ 1.29
CNTNAP1P78357 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP1P78357 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.12■■□□□ 1.29
CNTNAP1P78357 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
CNTNAP1P78357 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
CNTNAP1P78357 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.12■■□□□ 1.29
CNTNAP1P78357 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CNTNAP1P78357 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP1P78357 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.11■■□□□ 1.29
CNTNAP1P78357 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP1P78357 LINC01465-201ENST00000408887 1940 ntBASIC23.11■■□□□ 1.29
CNTNAP1P78357 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CNTNAP1P78357 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CNTNAP1P78357 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP1P78357 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP1P78357 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.11■■□□□ 1.29
CNTNAP1P78357 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP1P78357 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.11■■□□□ 1.29
CNTNAP1P78357 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP1P78357 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CNTNAP1P78357 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CNTNAP1P78357 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.1■■□□□ 1.29
CNTNAP1P78357 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
CNTNAP1P78357 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
CNTNAP1P78357 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP1P78357 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP1P78357 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP1P78357 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.1■■□□□ 1.29
CNTNAP1P78357 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.1■■□□□ 1.29
CNTNAP1P78357 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.1■■□□□ 1.29
CNTNAP1P78357 AL160237.2-201ENST00000556165 472 ntBASIC23.1■■□□□ 1.29
CNTNAP1P78357 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.1■■□□□ 1.29
CNTNAP1P78357 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.1■■□□□ 1.29
CNTNAP1P78357 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP1P78357 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP1P78357 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP1P78357 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CNTNAP1P78357 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNTNAP1P78357 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNTNAP1P78357 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.09■■□□□ 1.29
CNTNAP1P78357 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CNTNAP1P78357 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CNTNAP1P78357 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.09■■□□□ 1.29
CNTNAP1P78357 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNTNAP1P78357 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNTNAP1P78357 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms