Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SEC61A1P61619 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
SEC61A1P61619 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SEC61A1P61619 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SEC61A1P61619 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
SEC61A1P61619 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SEC61A1P61619 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC61A1P61619 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.92■□□□□ 0.3
SEC61A1P61619 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC61A1P61619 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SEC61A1P61619 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SEC61A1P61619 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.92■□□□□ 0.3
SEC61A1P61619 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SEC61A1P61619 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC61A1P61619 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC61A1P61619 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.92■□□□□ 0.3
SEC61A1P61619 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.92■□□□□ 0.3
SEC61A1P61619 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.92■□□□□ 0.3
SEC61A1P61619 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.92■□□□□ 0.3
SEC61A1P61619 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.92■□□□□ 0.3
SEC61A1P61619 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SEC61A1P61619 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SEC61A1P61619 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.92■□□□□ 0.3
SEC61A1P61619 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.92■□□□□ 0.3
SEC61A1P61619 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC61A1P61619 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SEC61A1P61619 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
SEC61A1P61619 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.91■□□□□ 0.3
SEC61A1P61619 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.91■□□□□ 0.3
SEC61A1P61619 UNC93B5-201ENST00000530315 699 ntBASIC16.91■□□□□ 0.3
SEC61A1P61619 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.91■□□□□ 0.3
SEC61A1P61619 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.91■□□□□ 0.3
SEC61A1P61619 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SEC61A1P61619 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.91■□□□□ 0.3
SEC61A1P61619 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.91■□□□□ 0.3
SEC61A1P61619 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.91■□□□□ 0.3
SEC61A1P61619 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61A1P61619 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SEC61A1P61619 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SEC61A1P61619 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.9■□□□□ 0.3
SEC61A1P61619 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.9■□□□□ 0.3
SEC61A1P61619 AC092368.3-202ENST00000574180 1591 ntBASIC16.9■□□□□ 0.3
SEC61A1P61619 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 PGM5P4-201ENST00000421970 445 ntBASIC16.9■□□□□ 0.3
SEC61A1P61619 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.9■□□□□ 0.3
SEC61A1P61619 AC060766.5-201ENST00000590539 871 ntBASIC16.9■□□□□ 0.3
SEC61A1P61619 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.9■□□□□ 0.3
SEC61A1P61619 HLA-B-256ENST00000639848 1089 ntBASIC16.9■□□□□ 0.3
SEC61A1P61619 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SEC61A1P61619 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.9■□□□□ 0.3
SEC61A1P61619 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SEC61A1P61619 AC020763.4-201ENST00000623414 4170 ntBASIC16.9■□□□□ 0.3
SEC61A1P61619 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.9■□□□□ 0.3
SEC61A1P61619 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SEC61A1P61619 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SEC61A1P61619 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 1371 ms