Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.73■□□□□ 0.43
CDC42P60953 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC42P60953 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC42P60953 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDC42P60953 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC42P60953 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC42P60953 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC42P60953 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CDC42P60953 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42P60953 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.72■□□□□ 0.43
CDC42P60953 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.72■□□□□ 0.43
CDC42P60953 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.72■□□□□ 0.43
CDC42P60953 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.72■□□□□ 0.43
CDC42P60953 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDC42P60953 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDC42P60953 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDC42P60953 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDC42P60953 YBX1P1-201ENST00000445822 960 ntBASIC17.72■□□□□ 0.43
CDC42P60953 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.72■□□□□ 0.43
CDC42P60953 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.72■□□□□ 0.43
CDC42P60953 AC100791.3-201ENST00000617619 330 ntBASIC17.72■□□□□ 0.43
CDC42P60953 AC105020.6-201ENST00000621523 1217 ntBASIC17.72■□□□□ 0.43
CDC42P60953 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDC42P60953 AL390961.4-201ENST00000623958 2535 ntBASIC17.72■□□□□ 0.43
CDC42P60953 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.72■□□□□ 0.43
CDC42P60953 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDC42P60953 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDC42P60953 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.71■□□□□ 0.43
CDC42P60953 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 TEX21P-204ENST00000641479 1693 ntBASIC17.71■□□□□ 0.43
CDC42P60953 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.71■□□□□ 0.43
CDC42P60953 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CDC42P60953 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.71■□□□□ 0.43
CDC42P60953 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.71■□□□□ 0.43
CDC42P60953 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.71■□□□□ 0.43
CDC42P60953 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.71■□□□□ 0.43
CDC42P60953 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.71■□□□□ 0.43
CDC42P60953 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.71■□□□□ 0.43
CDC42P60953 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDC42P60953 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDC42P60953 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.71■□□□□ 0.42
CDC42P60953 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDC42P60953 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.71■□□□□ 0.42
CDC42P60953 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC42P60953 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.7■□□□□ 0.42
CDC42P60953 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDC42P60953 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC42P60953 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC42P60953 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CDC42P60953 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDC42P60953 AC135050.7-201ENST00000624508 2218 ntBASIC17.7■□□□□ 0.42
CDC42P60953 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDC42P60953 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDC42P60953 MIR638-201ENST00000385237 100 ntBASIC17.7■□□□□ 0.42
CDC42P60953 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDC42P60953 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.7■□□□□ 0.42
CDC42P60953 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDC42P60953 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.7■□□□□ 0.42
CDC42P60953 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.7■□□□□ 0.42
CDC42P60953 AC016405.3-201ENST00000607710 860 ntBASIC17.7■□□□□ 0.42
CDC42P60953 AC090164.3-201ENST00000610780 2143 ntBASIC17.7■□□□□ 0.42
CDC42P60953 AC010536.3-201ENST00000620306 533 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms